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Yikes! Is this fungus or rot?

I noticed Bella was blasting some buds then I noticed what looked like sooty mold on the back of some leaves. I didn't do anything to the plant when I received it a couple weeks ago because it had several umbels on it. Needless to say, I checked the plant over this evening and noticed some leaves looked a little weird. I guess something is at them but don't really see anything.

I checked the roots (even though I know I may lose the flowers - I don't want to lose the whole plant). The roots are white but very fragile. The soil it came in is like garden soil or dirt. There were actually a couple of rocks in it. The roots don't look rotted to me but 2-3 inches up from the bottom stem looks kinda black. Is this still considered root rot or is it a fungus that can be treated? Here are some pictures. I'm not sure what to do.....


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